Life Science Login - integrated services

In the table below, you can find list of services that are currently integrated with the LS Login and you, as a user, can use them. Click on the row of a particular service to display more information.

Name Description Providing organization
AVATARS Advanced Virtuality and AugmenTed Reality AppRoaches in Seeds to Seeds Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben
B1MG POC FINLAND GPAP POC for B1MG project CNAG-CRG
B1MG POC SWEDEN GPAP POC for B1MG CNAG-CRG
BrainData The Finnish BrainData databank is a national resource for brain imaging data. The goal is to enable sharing of data amongst Finnish universities and university hospitals. The databank is coordinated, maintained and hosted by Aalto University. Aalto University
Breedfides Federated Data Infrastructure for Breeding reasearch data IPK
Cell Migration Repository The Cell Migration Repository is a community accessible cell migration data repository and knowledge-base, developed as part of the MULTIMOT project, to capture, disseminate and analyse multiscale cell migration data for biological and clinical applications. Weizmann Institute of Science
CESNET PRoxy IdP CESNET
RT Request Tracking system CESNET
Chalmers DS Wizard Data Stewardship Wizard at Chalmers University of Technology Chalmers University of Technology
Chalmers DSW Test Test instance of Data Stewardsip Wizard at Calmers Chalmers University of Technology
RCAuth Pilot Online CA RCAuth Pilot Online CA for providing end-user proxy certificates to Science Gateways and other portals Nikhef
Covid19 Spanish UseGalaxy Instance This is the Covid19 version of the spanish UseGalaxy Instance containing tools and workflows specialized on Covid19 analyses Barcelona Supercomputing Center
CSC User Authentication Authentication to CSC services CSC - Finnish IT Centre for Science Ltd
CSC´s Moodle e-learning platform eLena Here you can find the e-learning offering from CSC in Moodle e-learning platform. CSC – IT CENTER FOR SCIENCE LTD
CSC Sensitive Data Services platform Sensitive Data Services is a platform for managing sensitive data and computing on it at CSC - the Finnish IT Center for Science. CSC – IT Center for Science
Czech e-Infrastructure - Proxy CESNET
Data Stewardship Wizard A tool that helps researchers and data stewards in various research organizations to create Smart Data Management Plans for their projects. Researchers create a DMP by filling a questionnaire that interactively shows just relevant questions and guides using advice, FAIR metrics indications, and integrations with other services such as FAIRsharing. It has been developed in collaboration with ELIXIR-CZ and ELIXIR-NL. FIT CTU in Prague
de.NBI Berlin OpenStack Cloud Berlin de.NBI
de.NBI Cloud Bielefeld - OIDC OpenStack Cloud in Bielefeld. de.NBI
de.NBI Cloud Bielefeld Dashboard - development environment de.NBI Cloud Bielefeld Dashboard - development environment de.NBI Cloud Bielefeld
de.NBI Cloud DKFZ de.NBI
de.NBI Cloud Giessen AAI-enabled test server for de.NBI cloud in Giessen de.NBI
de.NBI Cloud Heidelberg OpenStack Cloud in Heidelberg. de.NBI
de.NBI Cloud Portal The de.NBI Cloud Portal represents the central access point to the federated de.NBI Cloud platform. de.NBI
de.NBI Cloud Tübingen The de.NBI cloud site Tübingen is part of the de.NBI network. It provides computing and storage resources for bioinformatics research. de.NBI
de.NBI Berlin kubernetes OpenStack kubernetes environment de.NBI
de.NBI Cloud EMBL EMBL node of de.NBI Cloud EMBL
de.NBI Cloud Events This service will be used for organizing de.NBI Cloud Events such as the de.NBI Cloud User Meeting, workshops and training courses. de.NBI
de.NBI Cloud Helpdesk The de.NBI Cloud offers a centraly hosted support helpdesk. de.NBI Cloud
de.NBI Giessen Kubermatic Access to kubermatic on de.NBI Giessen cloud site de.NBI
DSMZ Online tools The Leibniz Institute DSMZ developed a number of successful bioinformatics tools and databases. All tools are publicly available, easy to use and are free of charge. Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH
EBI OmicsDI Dataset discovery across a heterogeneous, distributed group of Transcriptomics, Genomics, Proteomics and Metabolomics data resources EBI
ECP Moonshot CWLabGUI
Edirex pipeline Edirex pipeline Masaryk University
Eduuni-ID Eduuni-ID is an email address based identity management service, which enables flexible collaboration across organisation and ecosystem boundaries. CSC - IT Center for Science Ltd.
EGI AAI Service Provider Proxy Service provider proxy for all federated EGI services EGI Foundation
Ehden Elixir AAI for EHDEN Platform. UA.PT Bioinformatics
EHDEN Academy EHDEN
Elixir MFA Proxy SP Proxy offering MFA CSC
ELIXIR Intranet ELIXIR Intranet ELIXIR Hub
ELIXIR IT IAM Client Identity service for RECAS-BARI users. RECAS-BARI site provides cloud resources to the ELIXIR-ITALY community, including the Laniakea based galaxy on-demand service. INFN Bari
Data Submission System - ELIXIR Luxembourg ELIXIR-Luxembourg's Human Data Submission System ELIXIR Luxembourg
ELIXIR Norway Data Steward Wizard Data Steward Wizard instance for Life Scientist in Norway to assist with the generation of data management plans ELIXIR Norway
ELIXIR cafe Q&A forum for people involved in ELIXIR University of Tartu, Institute of Computer Science
elixir-beacon-network Login service for https://beacon-network.elixir-europe.org/ ELIXIR-FI (CSC)
ELIXIR-GR Cloud Infrastructure Cloud infrastructure being developed to offer a variety of bioinformatics services to both scientists of the ELIXIR-GR community and abroad. Athena Research Center - ELIXIR-GR
e-Learning Platform (EeLP) ELIXIR-SI e-Learning Platform (EeLP) (instance for testing) ELIXIR-Slovenia
ELIXIR AAI for Discovery Nexus Providing ELIXIR Authentication and Authorisation Infrastructure (AAI) for Discovery Nexus University of Leicester
ELIXIR AAI privacyIDEA Deployment of the MFA using privacyIDEA for providing the MFA functionality ELIXIR AAI
ELIXIR-ES Galaxy Server This is a production instance of a galaxyproject server Barcelona Supercomputing Center
ELIXIR SPReg Tool for managing integrated SAML and OIDC SPs/RPs ELIXIR
Embassy Cloud v4 - Site 1 Embassy Cloud v4 - Site 1 EMBL-EBI
EMBL-EBI Authentication Gateway Single Sign On for users of EMBL-EBI services EMBL-EBI
EMBL-EBI Authentication Gateway Single Sign On for users of EMBL-EBI services EMBL-EBI
EMBL-EBI Owncloud Collaboration and sharing tool managed by Owncloud EMBL-EBI
EMBL-EBI RDSDS The Reference Data Set Distribution Service (RDSDS) addresses this use case by providing a mechanism for storing the structure of a reference data set, and then providing data lifecycle management and subscription management services. This use case is one that we see occurring beyond the life-science community. The RDSDS is offered as a component in the emerging ELIXIR Compute Platform, distributing reference data sets (from the ELIXIR Data Platform) and from individual researchers from where the data sets originate to where the data sets are to be analysed. This service will hold technical metadata of the data stored in the Reference Data Set and the files that comprised a release. Once a release has been made, the files will be transferred to sites subscribing to releases of this Data Set using existing services and protocols (e.g. File Transfer Service(FTS3), Globus Transfer and GridFTP) and to use the ELIXIR Authentication and Authorisation Infrastructure (AAI) to manage access control. EMBL-EBI
EMBL-EBI TESK in CSC Implementation of TES, that together with (any) WES runner will create a distributed workflow service for scientists. (client that will be integrated with TEST environment) EMBL-EBI
euCanSHare VRE euCanSHare computational environment for next-generation multi-Study Heart research Barcelona Supercomputing Center
EUDAT B2ACCESS B2ACCESS is the central identity management service of EUDAT that enables access to EUDAT services. Forschungszentrum Juelich on behalf of EUDAT CDI
EukMap Taxonomy On-line Curation Platform of the Unieuk Project Station Biologique de Roscoff - CNRS / Sorbonne Université
Euro-BioImaging Euro-BioImaging is an extensive research infrastructure that provides open access to a broad range of state-of-the-art biological and biomedical imaging technologies. Euro-BioImaging also provides access to training and data services. Turku BioImaging, Åbo Akademi University
Euro-BioImaging Web Portal Euro-BioImaging Web Portal provides access to services (imaging technologies, training, data) of the Euro-BioImaging research infrastructure Euro-BioImaging
Europdx dataportal-dev
European Genome-phenome Archive European Genome-phenome Archive (EGA) is a controlled-access archive of human data consented for research use. EMBL-EBI & CRG
FAIRDOMHub A repository for storing and sharing data, models, protocols and publications relating to systems biology research projects. University of Manchester
FlyMine An integrated database for Drosophila genomics InterMine
Galaxy Europe Galaxy is a workflow platform. Upload your data, run tools and workflows to analyse it, visualise the results. de.NBI
GPAP Playground Playground version of GPAP CNAG-CRG
HCA Ingest The Ingestion Service provides a suite of services to facilitate the contribution of data and metadata to the Data Coordination Platform (DCP) of Human Cell Atlas (HCA) project. EMBL-EBI
Herodote New serverless data manager, ie user upload data and automatically triggers some transformation/analysis on it New service in development GenOuest core facility
HNSC AAI (IBM) Provision of Federation between HNSC AAI (IBM) and Elixir Entity ID IBM Germany
https://weskit.bihealth.org This de.NBI cloud platform is used for workflow execution platform based on WESkit software. Charité Universitätsmedizin Berlin
HumanMine An integrated database of Homo sapiens genomic data InterMine
HYPATIA HYPATIA: The ELIXIR-GR Cloud infrastructure ATHENA Research Center
ipec International Psychosis Epidemic Consortium RoQua
KPI Tracking de.NBI Webapplication to track KPIs for de.NBI services IPK Gatersleben
Krini Web portal for operationalizing the ELIXIR::GA4GH Cloud ELIXIR Cloud & AAI
KubeFlow CERIT-SC KubeFlow CERIT-SC CERIT-SC
LCSB Keycloak LCSB Keycloak Luxembourg Centre for Systems Biomedicine
LifeCycle Optimising early-life conditions to maximise human potential across the life cycle LifeCycle
LS AAI Service catalogue Service for managing and displaying list of Relying Services integrated in the LS AAI ICS MUNI
PMCV force field correction Pipeline used for calculation of molecule force field correction CESNET, z. s. p. o
Meta-pipe Production Meta-pipe Production N/A
MetaCentrum Cloud MetaCentrum Cloud offers a flexible computing and storage environment suitable for a wide variety of applications and scientific use cases. The service is owned and operated as a joint venture of CESNET, the national e-infrastructure for science, development, and education in Czech Republic and Institute of Computer Science of Masaryk University. CESNET, a.l.e.
Marine Metagenomic Portal Marine metagenomic reference databases and Metapipe workflow Elixir Norway
MOLGENIS MOLGENIS: a data platform for researchers to accelerate scientific collaborations and for bioinformaticians who want to make researchers happy. MOLGENIS
MuG VRE The MuG Virtual Research Environment (VRE) supports the expanding 3D/4D genomics community by developing tools to integrate the navigation in genomics data from sequence to 3D/4D chromatin dynamics data. Multiscale Complex Genomics (MuG) Consortium
Oidc-agent Oidc-agent is a tool to manage OpenID Connect tokens and make them easily usable from the command line. KIT
OpenEBench OpenEBench is an infrastructure designed to establish a continuous automated benchmarking system for bioinformatics methods, tools and web services. Barcelona Supercomputing Center
OpenRiskNet SSO SSO environment (Keycloak) used in the OpenRiskNet project (Horizon 2020 project number 731075) wants to use Elixir AAI as one of its available Authentication providers using OIDC. OpenRiskNet
pcn Psychiatric care network RoQua
Plant Genomics and Phenomics Research Data Repository (PGP) The PGP-Repository was designed as infrastructure to comprehensively publish plant research data. Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben
portaloid Elixir AAI through Keycloak for BioDATEN and DataPLANT hubs Eberhard Karls Universitaet Tuebingen
ProCancer-I platform Access to the EU-funded project ProCancer-I platform for integrating imaging data and AI models for prostate cancer research FORTH-ICS
Rancher e-INFRA CZ GUI for Kubernetes Clusters Masaryk University
Rancher CERIT-SC Rancher is a management tool enabling comofortable utilization and administration of Kuberentes cluster CESNET
RD-Connect Sample Catalogue The RD-Connect Sample Catalogue is a catalogue of Rare Disease biosamples available for research use University Medical Center Groningen
Redmine Project management software provided by CESNET/ELIXIR-CZ CESNET
SARS-CoV-2 Database Database of highly curated sample metadata related to SARS-CoV-2 virus Elixir Norway
SciLifeLab DSW The SciLifeLab DSW instance is intended to aid users from Swedish Universities to make data management plans. Other users are also welcome. SciLifeLab (Data Centre and NBIS/ELIXIR-SE)
SciLifeLab Serve Service for model and app deployment offered to life science researchers in Sweden SciLifeLab (Data Centre)
SDS Rems Rems instance for Sensitive data submission. The rems is used for applying and permitting usage of data. CSC
SIWAA Workbench for agroecosystems simulations and analytics. A galaxy instance dedicated to the design of agroecosystems simulation workflows. Ancelet Estelle
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq's brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
SixSq Federated Identity Portal A federated identity portal for authenticating users within SixSq`s brokerage service, Nuvla. This feature comes as a requirement and added-value for multiple European funded projects, including HNSciCloud SixSq
Software Management Wizard DSW-based tool for creating software management plans FIT CTU in Prague
Swedish EGA Repository Archive for the Swedish part of the Federated EGA. The archive stores human genomes from research projects. National Bioinformatics Infrastructure Sweden
Swedish Sensitive Data Archive Archive for research data that falls under GDPR regulations. National Bioinformatics Infrastructure Sweden
SweFreq The Swedish Frequency resource for genomics (SweFreq) is a website developed to make genomic datasets more findable and accessible in order to promote collaboration, new research and increase public benefit. National Bioinformatic Infrastructure Sweden
TeSS TeSS is ELIXIR's Training e-Support System, developed by ELIXIR-UK, for disseminating, discovering and packaging training resources. ELIXIR-UK
ToL STS Sanger Institute Tree of Life Programme, Sample tracking system (STS). STS is used to manage sample information for all ToL Programme projects Wellcome Sanger Institute, Genome Research Limited
TrackFind Web (and REST) service for searching and curating FAIR genomic track metadata. Delivery of ELIXIR IS: “FAIRification of Genomic Tracks”. University of Oslo
Tree of Life Identifiers (ToLID) Sanger Institute Tree of Life Programme, Tree of Life Identifier service. Wellcome Sanger Institute, Genome Research Limited
UGent - Dodona UGent - Dodona Ghent University
UMSA Galaxy This is a Galaxy service used for executing data pipelines of scientists. Recetox MUNI
UniCatDB Universal Catalog Database for biological findings Department of Computer Science, Faculty of Science, University of South Bohemia
UniCatDB (TEST) Universal Catalog Database for biological findings (TEST environment) Department of Computer Science, Faculty of Science, University of South Bohemia
UniEuk - EukMap (Test Server) Taxonomy Online Curation Platform SILVA Team
usegalaxy.be Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biomedical research. VIB (Lead Node ELIXIR)
usegalaxy.fr This new Galaxy instance is deployed on the national IFB Core Cluster (ELIXIR French node). It aims at gathering different French Galaxy instances in one place and at benefiting from the power of the national instance to offer an enhanced storage and computing capacity. It will sticks as possible to the practices of the usegalaxy.* federation. IFB / ELIXIR-FR
WebFTS WebFTS for ELIXIR CESNET
WorkflowHub A registry of computational workflows, created for the EOSC-Life WP2 Tools Collaboratory. University of Manchester
S3 Minio Elixir-CZ Endpoint S3 storage service via Minio server hosted on Elixir-CZ Masaryk University
Bioimage ANalysis Desktop Cloud based Bioimage analysis desktop accessible with a web browser. EMBL
ELIXIR GA4GH Passport Echo Client Client to view GA4GH Passports issued by the ELIXIR Masaryk University
Login Aggregator for Kubernetes A login aggregator (dex) that will be used for user authentication for certain Kubernetes services Masaryk University
Dodona Dodona is a free online exercise platform for learning to code. UGent